CDS

Accession Number TCMCG007C31963
gbkey CDS
Protein Id XP_033147367.1
Location join(<12411959..12412327,12412524..12412676,12413015..12413144,12413347..12413443,12413608..12413728,12414042..12414101,12414247..12414297,12414369..12414464,12414592..12414693,12414848..12414970,12428533..12428676,12428764..12428835,12428910..12428985,12429067..12429209,12429294..12429402,12429492..12429679,12429775..12429864,12429942..12430124,12430201..12430380,12430466..12430537)
Gene LOC103849540
GeneID 103849540
Organism Brassica rapa

Protein

Length 852aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033291476.1
Definition alanine--tRNA ligase, partial [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03038        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01872        [VIEW IN KEGG]
EC 6.1.1.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004813        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006419        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016597        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0031406        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043177        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
GCTTCCGCAATATCTGAAAGCATACAAACAAGTATAGTATGCTGGTCAAATCCAACGAGAGACTCACACACCCACCATACAAGTGTATATAACCTTGATTTCTTGTCTTGGACTCTGTATATCTTTCTCACTCTTTCCTTGTTTCATGATGAACTTCCGTCTGGTTACCATACAAGTGTATATAACCAAGATTCAAATCAAATCAGTTACAGATTAAGGAAGAAGATTAAATCAATCAAGATTTTACATGTCCAGTATACTTTCGTCTTCCTTTGTAAACTCTCCCGAGTTGGTAACCGTGATGCGGCATCCTTAGTTAACAATGACGATCCAACATGTTTGGAAATATGGAACTTGGTGTTTATTCAGTTCAACAGAGAGATTGGTGGCTCACTTAAACCTCTGCCTGCGAAGCATGTTGACACCGGAATGGGTTTCGAGAGGTTGACTTCTGTTCTTCAGAACAAAATGAGCAACTATGATACAGATGTGTTCATGCCTATCTTTGATGACATCCAAAAGGCCACGGGAGCTAGGCCATATTCTGGAAAAATTGGTCTGGAAGATGTTGACAGAGTTGACATGGCTTATAGAGTGGTTGCTGATCACATTAGGACTCTATCCTTCGCTATTGCTGATGGCTCTCGTCCTGGTAATGAGGGCCGTGAGTATGTTCTGCGACATATTCTTCGTCGAGCAGTTCGCTATGGAAAGGAGATCCTAAAAGCTGAGGAAGGATTTTTCAACGGACTCGTAAGTTCTGTTATTCGGGTGATGGGTGATGTCTTTGGGGAGTTGAAGGAACATGAAAAAAAGATCACAGAGATAATCAAAGAAGAGGAAGCAAGCTTCTGCAAGACACTGGCAAAGGGAATTGAGAAGTTTCGGAAGGCTGGTCAGTCAGTTCAGGGGAATACGCTAAGTGGAGAGGATGCTTTTATATTATCGGCGACATATGGATTCCCTATAGAGCTGACTCAGTTAATGGCTGAAGAACACGGGTTGCTAGTTGATGTTGATGGTTTCAACAAAGCCAAGAAAGAGGCGAGGGATATATCAAAGAATGCCCAGAATAAGCAAGCTGGTGGCACCATTGTCATGGATGCTAATGCTACATCAACGTTGCACAAGATGGGTGTTTCAGCAACAAATGATTCTTTCAAATACATTTGGTTCCAGGGTCACGATAGTGAAGTGAAGGGTATCTACACTGGCTCTGCTTTCCTGGAAAGTTCTGCCAGTGGCGATAATGTGGGACTAGTATTAGCGTCTACAAGTTTCTATCCTGAGCAGGGTGGTCAGATTTTTGACACAGGGATTATAGAAGGGTCATTTGGTACATTCAACGTGTGCAATGTCAAAATATTCGGGGGCTTTGTTCTTCATATTGGTAGTCTTTCTACAGAAACTGGAGAGGTATCGGTGGGGGATGAAGTAACTTGCAAGGTTGACTATGAGAGACGTAAACTCATCGCTCCTAATCATACTTGTACACATATGCTGAATTTTGCCCTGAAGGAAGTGCTCGGGGATCATATTGATCAGAAGGGGTCAATAGTTCTTCCTGAAAAACTACGATTTGATTTCTCCCATGGTGAGCCGGTTGATCCTGAAGATTTGAGAAAGATCGAGTCCATAGTGAATACACAAATTAAGGATGAATTAGAAGTATATTCAAAGGAATCTATTCTCTCTGAAGCCAAGCGCATCAAAGGTCTAAGAGCAGTGTTTGGAGAAGTCTACCCTGATCCTGTCAGAGTGGTTGCAATTGGGAGACGGGTGGAGGATCTCTTGGCTGACCCTGAAAACGATGAATGGTCATCACTTTCATCCGAGTTTTGTGGAGGAACCCACATAACAAACACACGCGAAGCCAAAGCGTTTGCTCTTCTATCAGAGGATGGCATTTCGAAAGGTATTCGTAGGATAATTGCTGTCACTACTAAATCTGCATTTGATTCTCTGAATACGGCGTCTTTGCTTGAAAAAGAAGTAGATGAGGCGTCCAAGGCGGTGGGAAATGCACTAGAAAAGAAAGTTAATGCTTTGAAAAGACGAGTAGATGAAGTAGATATCCCTGCAGCCAAAAGGGCGGATATCAAAGCCAAGATTGCTCAGCTTCAGAATGAAGTGAGGAAAGCTCAAAAGAAAATAGCAAAGGAAAACCTGAAGAAATCTGTAGAAATAGCAACAGAGGGAGCTGAGTCTGCAGCATCAGATGGGAAAAACTTCTGCATTGTCCAGCTTGATGTGGGACTTGATGCAGCTGCAGTTCGAGAGGCCGTTTCAAAAGTGATGCAAAAGAAGGGAATGTCCGTAATGGTGTTCAGCACAGATGAAAGCACAAATAAGGCGGTTGTGTGTGCTGGAGTTCCAGACAAATCTGATCAGTTCAAGCAATTAGACGTCACAGAATGGCTGACAACTGCGTTAAGTCCCATAAAAGGGAAGTGCGGGAAAGGAAAAAGTGGTCTCGCTTCGGGACAGGGAACGGATGCTTCCCAGGTGAGTTCGGCTTTGGACCTGGCTGCATCATTTGCCTCAATGAAGCTCAACTGA
Protein:  
ASAISESIQTSIVCWSNPTRDSHTHHTSVYNLDFLSWTLYIFLTLSLFHDELPSGYHTSVYNQDSNQISYRLRKKIKSIKILHVQYTFVFLCKLSRVGNRDAASLVNNDDPTCLEIWNLVFIQFNREIGGSLKPLPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKIGLEDVDRVDMAYRVVADHIRTLSFAIADGSRPGNEGREYVLRHILRRAVRYGKEILKAEEGFFNGLVSSVIRVMGDVFGELKEHEKKITEIIKEEEASFCKTLAKGIEKFRKAGQSVQGNTLSGEDAFILSATYGFPIELTQLMAEEHGLLVDVDGFNKAKKEARDISKNAQNKQAGGTIVMDANATSTLHKMGVSATNDSFKYIWFQGHDSEVKGIYTGSAFLESSASGDNVGLVLASTSFYPEQGGQIFDTGIIEGSFGTFNVCNVKIFGGFVLHIGSLSTETGEVSVGDEVTCKVDYERRKLIAPNHTCTHMLNFALKEVLGDHIDQKGSIVLPEKLRFDFSHGEPVDPEDLRKIESIVNTQIKDELEVYSKESILSEAKRIKGLRAVFGEVYPDPVRVVAIGRRVEDLLADPENDEWSSLSSEFCGGTHITNTREAKAFALLSEDGISKGIRRIIAVTTKSAFDSLNTASLLEKEVDEASKAVGNALEKKVNALKRRVDEVDIPAAKRADIKAKIAQLQNEVRKAQKKIAKENLKKSVEIATEGAESAASDGKNFCIVQLDVGLDAAAVREAVSKVMQKKGMSVMVFSTDESTNKAVVCAGVPDKSDQFKQLDVTEWLTTALSPIKGKCGKGKSGLASGQGTDASQVSSALDLAASFASMKLN